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Yeah, you're right, if the BIOS doesn't see the drive at all, Ubuntu won't see it either, if the BIOS is just failing to see it as a bootable drive, it might. I think Ubuntu is normally better at picking up dud drives than Windows is but if the Mobo isn't thinking it's connected, it won't pick it up.
You could use something like an Ubuntu Live which allows you to boot into Ubuntu using a CD or USB (no install). It's normally pretty good at mounting drives if they're readable. If the drive appears, you can have a look and see what's on it, you could mount an external drive and copy any data across, if it doesn't appear, it's probably dead.