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You can use the push command http://www.androidauthority.com/android-customization-transfer-files-adb-push-adb-pull-601015/
Or just restart the phone, and transfer it using google drive or something then boot back to recovery and install supersu.
That's what I thought, but I've not put SuperSU on the phone before I got started. Now I can't see the phone when I get it connected to my PC (save as a misc device, as above) which means I can't get it across. Is there another way of moving it to the phone using ADB?